CDS

Accession Number TCMCG051C46290
gbkey CDS
Protein Id XP_024445334.1
Location complement(join(77269..77334,78154..78282,79148..79264,79466..79530,79616..79655,79845..79907,79990..80305,80425..80504))
Gene LOC18107579
GeneID 18107579
Organism Populus trichocarpa

Protein

Length 291aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024589566.1
Definition endonuclease V isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description endonuclease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K21813        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000287        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016888        [VIEW IN EMBL-EBI]
GO:0016891        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATCATGGTCTTCGTCATGGACGGGATCAGGGAGAATCATCATCATCAATTGAAATCCAAAATCAATGGAGAGAGATTCAAGATTTACTTAAAGAGAGGTTGATAACACAGGATGATTTCCCTTGGAAACTGCCCATACCCAGCAGTAGCGGCAATGTTGTTGTTGAAGAAGAAGAAGGAACGTTATTGAAATATGTGGGTGGGGTTGATGTAAGCTATTCTAAGGAATTAGACTCAGCAGCAGCAGCAGCATCAACGGCAGCATGCGGATGTGGAAGCCTTGTTGTTTTGGATGTCACCACTCCCACACTGCAAGTCGTCTACCAAGATTTCTTTCTCCTCACCAATTTCGATGTCCCTTATATTCCTTCCTTCCTTGCTTTCCGAGAGGCTCCAATACTCTTACAACTCTTACAGAAGATGAAAAACACTGACAATCCATTCTACCCCCAGTTACTGCTTGTTGATGGCAATGGTTTGCTTCATCCTCGAGGTTTCGGCTTGGCTTGCCATCTTGGTGTCCTGGCTAATATCCCCACCATTGGCATAGGAAAGAATCTGCATCATATTGATGGTCTCACTCAATCTGGAGTGAGACAGCTTCTTCAGGCCAAAGATAACAGTGGTGAAGATTTTATTACTTTGACGGGATCCTCTGGCTGTGTATGGGGAGCGGCAATGAGATCAACCAAGGGCTCATGTAAACCCATATATATTTCTGTTGGTCACCGTGTCTCTCTCAATACTGCCATCAAAATTGTGAAAATGATTTGCAAGTATCGTGTGCCAGAGCCTATCCGGCAGGCTGATATAAGATCAAGAGACTACCTCCAAAAGAATAGTTGTGGGAATGGTCGAACATTGCAGTAG
Protein:  
MDDHGLRHGRDQGESSSSIEIQNQWREIQDLLKERLITQDDFPWKLPIPSSSGNVVVEEEEGTLLKYVGGVDVSYSKELDSAAAAASTAACGCGSLVVLDVTTPTLQVVYQDFFLLTNFDVPYIPSFLAFREAPILLQLLQKMKNTDNPFYPQLLLVDGNGLLHPRGFGLACHLGVLANIPTIGIGKNLHHIDGLTQSGVRQLLQAKDNSGEDFITLTGSSGCVWGAAMRSTKGSCKPIYISVGHRVSLNTAIKIVKMICKYRVPEPIRQADIRSRDYLQKNSCGNGRTLQ